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Bottom: Molecular dynamics image* of a somewhat more realistic lipid bilayer membrane. The polar moieties of the lipid headgroup are shown in color and the acyl chain carbons are shown in black. Notice that the interface between the polar and nonpolar parts of the memrbane is indiscriminate, and occupies a significant fraction of the membrane thickness. This molecular dynamics image was based on the experimentally determined structural information shown in the two images below. *H Heller, M Schaefer, & K Schulten, "Molecular dynamics simulation of a bilayer of 200 lipids in the gel and in the liquid-crystal phases" J. Phys. Chem. 97:8343-60, 1993. |
Experimentally determined distributions of mass in
a lipid bilayer membrane. These Gaussian distributions are derived from
combined X-ray and neutron diffraction studies of a dioleoylphosphatidylcholine
bilayer at low hydration*. Notice that the polar group distribution extends
well into the hydrocarbon region and visa-versa. This makes for a broad
highly anisotropic "interface".
The red line is the calculated density of atomic partial charge. It is an approximate measurement of the polarity gradient across the membrane. This charge profile clearly demonstrates the broad interfacial polarity gradient. *Wiener MC, White SH. Structure of a fluid dioleoylphosphatidylcholine bilayer determined by joint refinement of x-ray and neutron diffraction data. III. Complete structure. Biophys J 1992, 61(2):437-47. |
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Another representation of the polarity gradient
across the lipid bilayer membrane. Notice that the two interfaces occupy
approximately half the thickness of the membrane, and can easily accomodate
peptides and proteins as shown by the a-helix
cross section which is drawn to scale in this figure.
Many of the important interactions in membrane protein folding take place in this interface. |
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