GBCH723 Spring 2002
Room 5001 4:00-6:00 PM


Date
Day
Topic Instructor
15-Jan
T
Introduction, internet, databases, Nolan
22-Jan
T
Sequence alignments* Nolan
29-Jan
T
Genome analysis: mapping and assembly* Nolan
5-Feb
T
Genome analysis: comparison and annotation Nolan
12-Feb
T
Mardi Gras Holiday  
19-Feb
T
DNA Sequence analysis: promoters, splicing, ORFs Nolan
26-Feb
T
Multiple Sequence Alignments* Nolan
5-Mar
T
Phylogenetic analysis, RNA structure prediction Nolan
12-Mar
T
Combinatorial Methods: Random NAs and activity selection Nolan
19-Mar
T
Combinatorial Methods: proteins, Protein sequences Wimley
26-Mar
T
Spring Break  
2-Apr
T
Protein sequence and structure prediction* Wimley
9- Apr
T
Data Mining* Nolan
16- Apr
T
Yeast methods: 2-hybrid and others Hyman
23- Apr
T
Yeast Methods: Proteomic Analyses of Multimeric Complexes Lustig
10-May
F
Exam 1:00 — 3:00 PM (note date and time)  

* Indicates related student exercise


Assignments

22-Jan Sequence alignment assignment
29-Jan Human Genome Sequence Papers
Science v. 291, pp 1304-1351.
Nature 409, 860-921 (15 February 2001)
2-Feb Sequence Assembly project. Please sign up to use the computer.
5-Mar Multiple Sequence Alignment
Some of your results
For 12-Mar Look at the pdf file of Ekland et al on in vitro selection to discuss next time


Contact information:
Jim Nolan- Course Director Dept. Biochemistry, room 6053
Phone: 584-2453 jnolan@tulane.edu
GBCH723 web address: http://www.tulane.edu/~biochem/lecture/723/GBCH723syl.htm
Biochemistry Department web address: http://www.tulane.edu/~biochem
Biochemistry Department courses: http://www.tulane.edu/~biochem/classmat.htm
Tulane’s Emergency Information Page for notification of school closings http://emergency.tulane.edu