|
Date
|
|
Topic | Instructor |
|
15-Jan
|
|
Introduction, internet, databases, | Nolan |
|
22-Jan
|
|
Sequence alignments* | Nolan |
|
29-Jan
|
|
Genome analysis: mapping and assembly* | Nolan |
|
5-Feb
|
|
Genome analysis: comparison and annotation | Nolan |
|
12-Feb
|
|
Mardi Gras Holiday | |
|
19-Feb
|
|
DNA Sequence analysis: promoters, splicing, ORFs | Nolan |
|
26-Feb
|
|
Multiple Sequence Alignments* | Nolan |
|
5-Mar
|
|
Phylogenetic analysis, RNA structure prediction | Nolan |
|
12-Mar
|
|
Combinatorial Methods: Random NAs and activity selection | Nolan |
|
19-Mar
|
|
Combinatorial Methods: proteins, Protein sequences | Wimley |
|
26-Mar
|
|
Spring Break | |
|
2-Apr
|
|
Protein sequence and structure prediction* | Wimley |
|
9- Apr
|
|
Data Mining* | Nolan |
|
16- Apr
|
|
Yeast methods: 2-hybrid and others | Hyman |
|
23- Apr
|
|
Yeast Methods: Proteomic Analyses of Multimeric Complexes | Lustig |
|
10-May
|
|
Exam 1:00 — 3:00 PM (note date and time) |
* Indicates related student exercise
| 22-Jan | Sequence alignment assignment |
| 29-Jan | Human
Genome Sequence Papers
Science v. 291, pp 1304-1351. Nature 409, 860-921 (15 February 2001) |
| 2-Feb | Sequence Assembly project. Please sign up to use the computer. |
| 5-Mar | Multiple
Sequence Alignment
Some of your results |
| For 12-Mar | Look at the pdf file of Ekland et al on in vitro selection to discuss next time |
Contact information:
Jim Nolan- Course Director Dept.
Biochemistry, room 6053
Phone: 584-2453 jnolan@tulane.edu
GBCH723 web address: http://www.tulane.edu/~biochem/lecture/723/GBCH723syl.htm
Biochemistry Department web address:
http://www.tulane.edu/~biochem
Biochemistry Department courses:
http://www.tulane.edu/~biochem/classmat.htm
Tulane’s Emergency Information Page
for notification of school closings http://emergency.tulane.edu