Protein Folding in vivo

Required reading:

Lodish 50-78
 Landry's Web page "Protein Interactions and Molecular Chaperones"
 DebBurman, Raymond, Caughey, Lindquist (1997) "Chaperone-supervised conversion of prion protein to its protease-resistant form"

Sample questions for the exam:

  1. What treatments were used by DebBurman et al. in order to affect the protein-protein interactions of PrPC and PrPSc?
  2. Some chaperones promoted conversion of PrPC to PrP-res, but others did not.  What feature(s) distinguish them and might account for the difference in activity?
  3. Suggest a mechanism by which GroES inhibits GroEL-dependent formation of PrP-res.  Account for the fact that GroES does not inhibit GroEL-dependent formation of PrP-res when the PrPSc is pratially denatured.

Additional reading on chaperones and evolution:

Rutherford and Lindquist (1998) "Hsp90 as a capacitor for morphological evolution"
News and Views for above
Critical comment by Dickinson and Seger
Lindquist response
True and Lindquist (2000) "A yeast prion provides a mechanism for genetic variation and phenotypic diversity"